3. Compute Module

The compute module has code for computations on Reeb graphs and merge trees. However, this has largely been deprecated in version 0.1.0 so enter at your own risk.

• 3.1. Degree
  • up_degree()
  • down_degree()
  • add_nodes()
  • minimal_reeb()
  • remove_isolates()
  • heights()
• 3.2. Draw
  • dict_to_list()
  • line_loop_index()
  • slope_intercept()
  • bezier_curve()
  • reeb_plot()
• 3.3. Merge
  • isMerge()
  • computeMergeTree()
• 3.4. Union Find
  • signedDistToLine2Pts()
  • getSortedNodeHeights()
  • UnionFind
• 3.5. Distance
  • edit()
  • findFiltration()
  • getHeightMatrix()
  • calcDistanceMatrix()
  • calcDistanceInfNorm()
  • getUnitVector()
  • getMidpointKey()
  • computeGraphDistanceAtAngle()
  • computeDistanceAtAngleFromMT()
  • computeDistanceFull()
  • directedMergeTreeDistance()